Package: ComICS 1.0.4

ComICS: Computational Methods for Immune Cell-Type Subsets

Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.

Authors:Yael Steuerman [aut, cre], Irit Gat-Viks [aut]

ComICS_1.0.4.tar.gz
ComICS_1.0.4.zip(r-4.7-any)ComICS_1.0.4.zip(r-4.6-any)ComICS_1.0.4.zip(r-4.5-any)
ComICS_1.0.4.tgz(r-4.6-any)ComICS_1.0.4.tgz(r-4.5-any)
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ComICS_1.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ComICS/json (API)

# Install 'ComICS' in R:
install.packages('ComICS', repos = c('https://yaelsteu.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.95 score 1 stars 4 packages 30 scripts 1.3k downloads 2 mentions 2 exports 10 dependencies

Last updated from:3e0b1f9fcc. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK120
source / vignettesOK186
linux-release-x86_64OK142
macos-release-arm64OK167
macos-oldrel-arm64OK132
windows-develOK69
windows-releaseOK78
windows-oldrelOK87
wasm-releaseOK91

Exports:dcqvocal

Dependencies:codetoolsforeachglmnetiteratorslatticeMatrixRcppRcppEigenshapesurvival